CDS
| Accession Number | TCMCG075C07732 |
| gbkey | CDS |
| Protein Id | XP_007045552.2 |
| Location | complement(join(38141612..38142445,38144927..38145077,38146253..38148084,38149091..38149603)) |
| Gene | LOC18610049 |
| GeneID | 18610049 |
| Organism | Theobroma cacao |
Protein
| Length | 1109aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA341501 |
| db_source | XM_007045490.2 |
| Definition | PREDICTED: RNA-dependent RNA polymerase 1 [Theobroma cacao] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11699
[VIEW IN KEGG] |
| EC |
2.7.7.48
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGGGTAAGACAATTCAAGTTTCTAGATTCCCCTCAAATGTGCATGCAGAGGAAGTTAAAACATTTTTGGAGTCGTATACAGGCAAGGAAACTGTTTATGCCCTAAAAATTAGGCAGCAAAAAAACGGAGGAAGAGCATATGCTATTGTGCAATTTACCAAAAGCACAGATGCTGAGCTGATCATAAGGTTGACGAATCAAAGACTATACTATGGGAGTTCATATCTCAAGGCTCGAGAAATGGAGAATGATATTGTGCCAAAACCAAGAACCTTTTTGCATACCATGGAAGGTGTGACACTGCATTTTGGTTGTCAGGTCTCAAATGAAAAATTTTATGTTCTCTGGGAAGAGGTTGATGTTACAGTGAATTTTGGGATGGGAATGCGGAAATTGCAATTTTTACTGTCACATCATTGCGTAGAATACAGGCTGGATCTTTTCTATGAGAACATCTGGCAGATTGAGCTGCATCGTCCGCGCAATCAAACATCAAAGTATCTGCTGATTCAGTTATTTGGCGCTCCTCGGATATATGAGAAAGATGTACGCTCTTCTGGACTTGTGTTTGAGAATCCCTTGCTGAACTATTTTATGGATGTGCCTGATGATCAATGGGTAAGGACAACTGATTTCACTCAATCATCCTGTATCGGGCAGTCTTCTGTATTGTGTTTGGAGCTTCCTTACTACCTGCAACTTCCAAATTTCCGAGAAAACTTTGCTTACTACAAGGAAAGTGAAGGGAAATTTGTTTTGGAAAGTGGTTCTTCTTATTCCCGTAATCTTAATCTAGTCCCAATTGTAGGCCCTTCACTGGGAATTGACTTGCCATATGAAATCTTGTTTAAGATTAATTTGTTGGTCCAAAATGGGTGTATCCCAGGACCAGCACTTGATGCTAATTTTTACCGATTGGTTAATCCATGTAGAATAGACAAAGTCTATATCGACCATGCTCTGGAGAAACTTTATTATCTTAAAGAATGCTGCTTTGAACCTTCAAAGTGGCTCCTTGAGCAGTACAAAGGTTACATCGCATCTAAGAAAAACCCAGGGTCACCTGTTATATCCTTGGATGATGGTTTGGTAAATGTAAGAAGGGTTCAGATAACACCTTCTAGGGTGTATTTCTGTGGTCCGGAGATTAATGTTTCAAATCGTGTACTACGCCATTTTCATGATGACATTGATAACTTTCTTCGCATCACTTTTGTTGATGAGGAGTTGGAAAAGATCCATTCCACAGATTTGTTGACGAGGAATAGGATAACTGAAATTTATGGAAGGATTCTTTCTACTCTTAAAAATGGCATAGTCATTGGTGATAAGCAATTTGAATTTCTTGCCTTTTCATCTAGTCAATTACGGGAAAATTCAGCATGGATGTTTGCTTCTAGAGAAGGGCTCACTGCAGCAGATATAAGGACATGGATGGGAGAGTTTAGTAAAATAAGAAATGTGGCAAAGTATGCTGCTAGACTGGGCCAATCTTTCAGTTCATCAACCGAAACTCTTAGTGTTGCTAAAGATGAAATCGAAATTATTGATGATGTAGAAATTAAAAGGGATGGAATTAATTATGTCTTTTCTGATGGAATTGGAAAAATATCGGCTAAATTTGCGAAGAAGGTGGCTGCAAAATGTCGCTTGAATGGTCGCACCCCTTCAGCATTTCAGATTCGGATCGGTGGATTCAAAGGTGTTGTGGCTGTTGACCCCACCTCATCAAAGAAATTATCCCTTAGAGGGAGCATGTCAAAGTATGAATCAGAGAACACAAAACTGGATGTCTTGGCTTGGAGTAAGTATCAACCTTGTTTTCTGAATCGCCAGTTGATCACTCTCTTGTCTACTCTTGGAGTTCCAGATCATGCTTTTGAGGAAAAACAAAGAGAGGTTGTTGATCAACTCAATGCTATCCTAACAGATCCTTTAAAGGCACAGGAGGCTCTGGAGTTAATGTCTCCTGGAGAGAATACTAACATTCTCAAGGAAATGCTCTTGTGTGGTTATGAACCTGATGCTGAACCATTCCTTTCCATGATGTTGCAAACATTTCGAGCATCAAAGTTACTGGAGTTGCGGACTAAAAGCAGGATATTTGTTGCAAATGGAAGGTCTATGATGGGATGTCTGGATGAAACCAGAACATTGGATTATGGCCAGGTGTTTGTGCAGGTTTCGGGCTCTAGGTCAGAGCAGCGTTTTATTGTTCAAGGTAAGGTAGTTGTTGCCAAAAATCCCTGCTTGCACCCAGGCGATGTGCGTGTTTTAACGGCTGTCAACGTGCCTGATTTGCACCATATGGTAGATTGTGTTGTTTTTCCACAGAAAGGAAGCAGACCTCATCCAAATGAGTGTTCTGGAAGTGATCTGGATGGTGATATCTACTTTGTCTGTTGGGACCCTGAATTGATTCCATCTAAACAAATACCTCCTATGGATTATTCACCAGCTCCAACTAAGCCATTGGAGCATGAAGTTACCATTGAGGAAGTTGAAGAGTATTTCACGAACTACATAGTCAATGACAGTTTAGGAATCATTGCAAATGCTCATACTGTTTTTGCTGATAGAGAGCCTCGGAAAGCAATGAGCAGCGAATGTAAATGGCTTGCAAAGCTGTTTTCAATTGCAGTTGACTTCCCAAAAACTGGTGTACCAGCTGAAATACCACAAGAACTGAGAGTTAAAGAGTATCCAGATTTCATGGAGAAGCCAGACAAACCAACCTATCAATCATACAATGTTATCGGAAAGCTTTTCCGAGAGGTGAAAGACCTTGCACCCAATGAATGCTTTATCAGGTCCTTAACTCGGGAAAGATTGGAGAGGTTTTATGATCCTGATATGGAAGTTGATGGCTATGAGGATTATGTTGATGATGCTTTCTATCACAAAAGCAATTATGATTACAAATTGGGGAACTTGATGGAATATTATGGGATCAAAACTGAGGCTGAAATACTCAGTGGGGGTATCATGAAAATGTCGAGATCTTTCACGAAGCAAAGAGATGCAGAAGCAATTGGTGTGGCTGTGAGGTCCTTGAGGAAGGAAGCTAGGTCATGGTTTAATGAAAAGGGAAATGGGTTAGATTCTGAAGCAGATGATCTATATGCAAAAGCCTCTGCTTGGTACCATGTCACGTATCATCCAAGTTATTGGGGCCTGTATAATGAGGGAATGAATAGGAATCATTTTCTGAGCTTTCCTTGGTGTGTTTATGACAAGCTGATCCTCATCAAGAAAAAGGTGACTAGTAGAAGAAATTCGCGATTGTCATCTCTAGAATCTCTGTTTGCACGTGGATTGCGTTTGCATTGA |
| Protein: MGKTIQVSRFPSNVHAEEVKTFLESYTGKETVYALKIRQQKNGGRAYAIVQFTKSTDAELIIRLTNQRLYYGSSYLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVSNEKFYVLWEEVDVTVNFGMGMRKLQFLLSHHCVEYRLDLFYENIWQIELHRPRNQTSKYLLIQLFGAPRIYEKDVRSSGLVFENPLLNYFMDVPDDQWVRTTDFTQSSCIGQSSVLCLELPYYLQLPNFRENFAYYKESEGKFVLESGSSYSRNLNLVPIVGPSLGIDLPYEILFKINLLVQNGCIPGPALDANFYRLVNPCRIDKVYIDHALEKLYYLKECCFEPSKWLLEQYKGYIASKKNPGSPVISLDDGLVNVRRVQITPSRVYFCGPEINVSNRVLRHFHDDIDNFLRITFVDEELEKIHSTDLLTRNRITEIYGRILSTLKNGIVIGDKQFEFLAFSSSQLRENSAWMFASREGLTAADIRTWMGEFSKIRNVAKYAARLGQSFSSSTETLSVAKDEIEIIDDVEIKRDGINYVFSDGIGKISAKFAKKVAAKCRLNGRTPSAFQIRIGGFKGVVAVDPTSSKKLSLRGSMSKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDHAFEEKQREVVDQLNAILTDPLKAQEALELMSPGENTNILKEMLLCGYEPDAEPFLSMMLQTFRASKLLELRTKSRIFVANGRSMMGCLDETRTLDYGQVFVQVSGSRSEQRFIVQGKVVVAKNPCLHPGDVRVLTAVNVPDLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPELIPSKQIPPMDYSPAPTKPLEHEVTIEEVEEYFTNYIVNDSLGIIANAHTVFADREPRKAMSSECKWLAKLFSIAVDFPKTGVPAEIPQELRVKEYPDFMEKPDKPTYQSYNVIGKLFREVKDLAPNECFIRSLTRERLERFYDPDMEVDGYEDYVDDAFYHKSNYDYKLGNLMEYYGIKTEAEILSGGIMKMSRSFTKQRDAEAIGVAVRSLRKEARSWFNEKGNGLDSEADDLYAKASAWYHVTYHPSYWGLYNEGMNRNHFLSFPWCVYDKLILIKKKVTSRRNSRLSSLESLFARGLRLH |